mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hgncji_p because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:53,483 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:54,470 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:54,655 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:15:12,427 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:15:12,689 - cnv_pipe.batch.run_model - INFO - Processing cluster 1249 with 141 probes
2026-06-03 05:15:13,135 - cnv_pipe.batch.run_model.cluster1249 - INFO - Child process started for cluster 1249 with 141 probes
2026-06-03 05:17:33,030 - cnv_pipe.batch.run_model.cluster1249 - INFO - Child process finished cluster 1249. Wrote cluster_1249_samples.csv and cluster_1249_params.csv
2026-06-03 05:17:33,032 - cnv_pipe.batch.run_model - INFO - Cluster 1249 finished in 140.34 seconds. Status: SUCCESS