File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/a6893fc815122a3ce9c1495e1cbb6f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0qiaa8si because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:42,259 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:43,264 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:43,453 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:15:02,493 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:15:02,585 - cnv_pipe.batch.run_model - INFO - Processing cluster 1190 with 196 probes
2026-06-03 05:15:03,174 - cnv_pipe.batch.run_model.cluster1190 - INFO - Child process started for cluster 1190 with 196 probes
2026-06-03 05:18:04,297 - cnv_pipe.batch.run_model.cluster1190 - INFO - Child process finished cluster 1190. Wrote cluster_1190_samples.csv and cluster_1190_params.csv
2026-06-03 05:18:04,299 - cnv_pipe.batch.run_model - INFO - Cluster 1190 finished in 181.71 seconds. Status: SUCCESS