mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hkkmbi82 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:12:53,597 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:12:54,386 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:12:54,553 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:09,374 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:09,569 - cnv_pipe.batch.run_model - INFO - Processing cluster 502 with 199 probes
2026-06-03 05:13:09,944 - cnv_pipe.batch.run_model.cluster502 - INFO - Child process started for cluster 502 with 199 probes
2026-06-03 05:16:17,829 - cnv_pipe.batch.run_model.cluster502 - INFO - Child process finished cluster 502. Wrote cluster_502_samples.csv and cluster_502_params.csv
2026-06-03 05:16:17,831 - cnv_pipe.batch.run_model - INFO - Cluster 502 finished in 188.26 seconds. Status: SUCCESS