mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-89glnuxx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:12:53,886 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:12:54,733 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:12:54,911 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:10,041 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:10,239 - cnv_pipe.batch.run_model - INFO - Processing cluster 509 with 194 probes
2026-06-03 05:13:10,623 - cnv_pipe.batch.run_model.cluster509 - INFO - Child process started for cluster 509 with 194 probes
2026-06-03 05:16:12,777 - cnv_pipe.batch.run_model.cluster509 - INFO - Child process finished cluster 509. Wrote cluster_509_samples.csv and cluster_509_params.csv
2026-06-03 05:16:12,779 - cnv_pipe.batch.run_model - INFO - Cluster 509 finished in 182.54 seconds. Status: SUCCESS