File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d0/63dccc9eabedbd0846cf7b161e5511/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pslyn__t because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:31,723 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:32,701 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:32,890 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:14:51,283 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:14:51,381 - cnv_pipe.batch.run_model - INFO - Processing cluster 1124 with 194 probes
2026-06-03 05:14:51,979 - cnv_pipe.batch.run_model.cluster1124 - INFO - Child process started for cluster 1124 with 194 probes
2026-06-03 05:17:56,150 - cnv_pipe.batch.run_model.cluster1124 - INFO - Child process finished cluster 1124. Wrote cluster_1124_samples.csv and cluster_1124_params.csv
2026-06-03 05:17:56,152 - cnv_pipe.batch.run_model - INFO - Cluster 1124 finished in 184.77 seconds. Status: SUCCESS