File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/584bfdd0b2104bf4a017b2ad1e036a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-adf_5i8x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:05,379 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:06,200 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:06,372 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:14:22,184 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:14:22,266 - cnv_pipe.batch.run_model - INFO - Processing cluster 927 with 124 probes
2026-06-03 05:14:22,645 - cnv_pipe.batch.run_model.cluster927 - INFO - Child process started for cluster 927 with 124 probes
2026-06-03 05:16:28,305 - cnv_pipe.batch.run_model.cluster927 - INFO - Child process finished cluster 927. Wrote cluster_927_samples.csv and cluster_927_params.csv
2026-06-03 05:16:28,307 - cnv_pipe.batch.run_model - INFO - Cluster 927 finished in 126.04 seconds. Status: SUCCESS