mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-n6_j2ie_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:29,203 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:30,515 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:30,793 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:55,080 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:55,212 - cnv_pipe.batch.run_model - INFO - Processing cluster 645 with 175 probes
2026-06-03 05:13:55,997 - cnv_pipe.batch.run_model.cluster645 - INFO - Child process started for cluster 645 with 175 probes
2026-06-03 05:18:23,730 - cnv_pipe.batch.run_model.cluster645 - INFO - Child process finished cluster 645. Wrote cluster_645_samples.csv and cluster_645_params.csv
2026-06-03 05:18:23,733 - cnv_pipe.batch.run_model - INFO - Cluster 645 finished in 268.52 seconds. Status: SUCCESS