File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/79/588eb6e288e7d3cc637377ea0cb6c4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6fimj9d_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:36,741 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:37,546 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:37,715 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:14:53,187 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:14:53,270 - cnv_pipe.batch.run_model - INFO - Processing cluster 1169 with 189 probes
2026-06-03 05:14:53,800 - cnv_pipe.batch.run_model.cluster1169 - INFO - Child process started for cluster 1169 with 189 probes
2026-06-03 05:17:58,796 - cnv_pipe.batch.run_model.cluster1169 - INFO - Child process finished cluster 1169. Wrote cluster_1169_samples.csv and cluster_1169_params.csv
2026-06-03 05:17:58,798 - cnv_pipe.batch.run_model - INFO - Cluster 1169 finished in 185.53 seconds. Status: SUCCESS