mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wni5tfsv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:24,277 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:25,075 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:25,245 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:14:41,641 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:14:41,911 - cnv_pipe.batch.run_model - INFO - Processing cluster 1064 with 165 probes
2026-06-03 05:14:42,360 - cnv_pipe.batch.run_model.cluster1064 - INFO - Child process started for cluster 1064 with 165 probes
2026-06-03 05:17:40,831 - cnv_pipe.batch.run_model.cluster1064 - INFO - Child process finished cluster 1064. Wrote cluster_1064_samples.csv and cluster_1064_params.csv
2026-06-03 05:17:40,834 - cnv_pipe.batch.run_model - INFO - Cluster 1064 finished in 178.92 seconds. Status: SUCCESS