mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-x54f6hqh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:23,453 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:24,254 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:24,423 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:39,801 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:39,977 - cnv_pipe.batch.run_model - INFO - Processing cluster 631 with 191 probes
2026-06-03 05:13:40,348 - cnv_pipe.batch.run_model.cluster631 - INFO - Child process started for cluster 631 with 191 probes
2026-06-03 05:16:49,517 - cnv_pipe.batch.run_model.cluster631 - INFO - Child process finished cluster 631. Wrote cluster_631_samples.csv and cluster_631_params.csv
2026-06-03 05:16:49,519 - cnv_pipe.batch.run_model - INFO - Cluster 631 finished in 189.54 seconds. Status: SUCCESS