mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gojoywqh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:06,975 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:07,822 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:07,999 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:14:24,112 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:14:24,320 - cnv_pipe.batch.run_model - INFO - Processing cluster 937 with 196 probes
2026-06-03 05:14:24,729 - cnv_pipe.batch.run_model.cluster937 - INFO - Child process started for cluster 937 with 196 probes
2026-06-03 05:17:31,792 - cnv_pipe.batch.run_model.cluster937 - INFO - Child process finished cluster 937. Wrote cluster_937_samples.csv and cluster_937_params.csv
2026-06-03 05:17:31,795 - cnv_pipe.batch.run_model - INFO - Cluster 937 finished in 187.47 seconds. Status: SUCCESS