File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/0f19a4522b5e9b573fecce4b5c4dd8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5eyn0ich because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:15:01,038 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:15:01,983 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:15:02,182 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:15:18,974 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:15:19,188 - cnv_pipe.batch.run_model - INFO - Processing cluster 1291 with 142 probes
2026-06-03 05:15:19,603 - cnv_pipe.batch.run_model.cluster1291 - INFO - Child process started for cluster 1291 with 142 probes
2026-06-03 05:17:40,867 - cnv_pipe.batch.run_model.cluster1291 - INFO - Child process finished cluster 1291. Wrote cluster_1291_samples.csv and cluster_1291_params.csv
2026-06-03 05:17:40,869 - cnv_pipe.batch.run_model - INFO - Cluster 1291 finished in 141.68 seconds. Status: SUCCESS