mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lherlk3_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:11:52,055 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:11:53,045 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:11:53,232 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:12:10,402 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:12:10,632 - cnv_pipe.batch.run_model - INFO - Processing cluster 111 with 188 probes
2026-06-03 05:12:11,079 - cnv_pipe.batch.run_model.cluster111 - INFO - Child process started for cluster 111 with 188 probes
2026-06-03 05:15:16,507 - cnv_pipe.batch.run_model.cluster111 - INFO - Child process finished cluster 111. Wrote cluster_111_samples.csv and cluster_111_params.csv
2026-06-03 05:15:16,509 - cnv_pipe.batch.run_model - INFO - Cluster 111 finished in 185.88 seconds. Status: SUCCESS