mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cdxxbqa1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:46,846 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:47,749 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:47,940 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:15:05,784 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:15:06,009 - cnv_pipe.batch.run_model - INFO - Processing cluster 1216 with 199 probes
2026-06-03 05:15:06,452 - cnv_pipe.batch.run_model.cluster1216 - INFO - Child process started for cluster 1216 with 199 probes
2026-06-03 05:18:09,878 - cnv_pipe.batch.run_model.cluster1216 - INFO - Child process finished cluster 1216. Wrote cluster_1216_samples.csv and cluster_1216_params.csv
2026-06-03 05:18:09,880 - cnv_pipe.batch.run_model - INFO - Cluster 1216 finished in 183.87 seconds. Status: SUCCESS