mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-csydqzmd because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:36,594 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:37,514 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:37,712 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:55,268 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:55,494 - cnv_pipe.batch.run_model - INFO - Processing cluster 728 with 192 probes
2026-06-03 05:13:55,899 - cnv_pipe.batch.run_model.cluster728 - INFO - Child process started for cluster 728 with 192 probes
2026-06-03 05:16:56,107 - cnv_pipe.batch.run_model.cluster728 - INFO - Child process finished cluster 728. Wrote cluster_728_samples.csv and cluster_728_params.csv
2026-06-03 05:16:56,110 - cnv_pipe.batch.run_model - INFO - Cluster 728 finished in 180.62 seconds. Status: SUCCESS