mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d8q0usm9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:08:42,160 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:08:43,071 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:08:43,257 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:09:29,218 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:09:29,326 - cnv_pipe.batch.run_model - INFO - Processing cluster 583 with 139 probes
2026-06-03 06:09:29,882 - cnv_pipe.batch.run_model.cluster583 - INFO - Child process started for cluster 583 with 139 probes
2026-06-03 06:13:28,575 - cnv_pipe.batch.run_model.cluster583 - INFO - Child process finished cluster 583. Wrote cluster_583_samples.csv and cluster_583_params.csv
2026-06-03 06:13:28,577 - cnv_pipe.batch.run_model - INFO - Cluster 583 finished in 239.25 seconds. Status: SUCCESS