mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xknw68wc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:09:56,433 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:09:57,292 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:09:57,472 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:10:41,861 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:10:42,094 - cnv_pipe.batch.run_model - INFO - Processing cluster 800 with 199 probes
2026-06-03 06:10:42,538 - cnv_pipe.batch.run_model.cluster800 - INFO - Child process started for cluster 800 with 199 probes
2026-06-03 06:16:05,957 - cnv_pipe.batch.run_model.cluster800 - INFO - Child process finished cluster 800. Wrote cluster_800_samples.csv and cluster_800_params.csv
2026-06-03 06:16:05,960 - cnv_pipe.batch.run_model - INFO - Cluster 800 finished in 323.87 seconds. Status: SUCCESS