mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vlukii39 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:05:33,108 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:05:33,994 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:05:34,175 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:06:19,831 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:06:20,133 - cnv_pipe.batch.run_model - INFO - Processing cluster 51 with 199 probes
2026-06-03 06:06:20,678 - cnv_pipe.batch.run_model.cluster51 - INFO - Child process started for cluster 51 with 199 probes
2026-06-03 06:11:30,628 - cnv_pipe.batch.run_model.cluster51 - INFO - Child process finished cluster 51. Wrote cluster_51_samples.csv and cluster_51_params.csv
2026-06-03 06:11:30,630 - cnv_pipe.batch.run_model - INFO - Cluster 51 finished in 310.50 seconds. Status: SUCCESS