mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zvm86p04 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:09:12,943 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:09:14,572 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:09:14,897 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:10:29,371 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:10:29,640 - cnv_pipe.batch.run_model - INFO - Processing cluster 650 with 141 probes
2026-06-03 06:10:30,332 - cnv_pipe.batch.run_model.cluster650 - INFO - Child process started for cluster 650 with 141 probes
2026-06-03 06:15:51,595 - cnv_pipe.batch.run_model.cluster650 - INFO - Child process finished cluster 650. Wrote cluster_650_samples.csv and cluster_650_params.csv
2026-06-03 06:15:51,597 - cnv_pipe.batch.run_model - INFO - Cluster 650 finished in 321.96 seconds. Status: SUCCESS