File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9d/99aa3dbbb4acac5ac36a82600d8abc/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-as3sgpaa because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:09:55,120 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:09:56,060 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:09:56,234 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:10:43,224 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:10:43,511 - cnv_pipe.batch.run_model - INFO - Processing cluster 797 with 189 probes
2026-06-03 06:10:43,935 - cnv_pipe.batch.run_model.cluster797 - INFO - Child process started for cluster 797 with 189 probes
2026-06-03 06:15:58,161 - cnv_pipe.batch.run_model.cluster797 - INFO - Child process finished cluster 797. Wrote cluster_797_samples.csv and cluster_797_params.csv
2026-06-03 06:15:58,163 - cnv_pipe.batch.run_model - INFO - Cluster 797 finished in 314.65 seconds. Status: SUCCESS