mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tj8xn5cl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:11:33,604 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:11:34,806 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:11:35,042 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:12:31,897 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:12:32,199 - cnv_pipe.batch.run_model - INFO - Processing cluster 1033 with 200 probes
2026-06-03 06:12:32,763 - cnv_pipe.batch.run_model.cluster1033 - INFO - Child process started for cluster 1033 with 200 probes
2026-06-03 06:18:44,218 - cnv_pipe.batch.run_model.cluster1033 - INFO - Child process finished cluster 1033. Wrote cluster_1033_samples.csv and cluster_1033_params.csv
2026-06-03 06:18:44,221 - cnv_pipe.batch.run_model - INFO - Cluster 1033 finished in 372.02 seconds. Status: SUCCESS