mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ki1vkuv_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:11:33,403 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:11:34,362 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:11:34,543 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:12:21,801 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:12:22,030 - cnv_pipe.batch.run_model - INFO - Processing cluster 1039 with 97 probes
2026-06-03 06:12:22,447 - cnv_pipe.batch.run_model.cluster1039 - INFO - Child process started for cluster 1039 with 97 probes
2026-06-03 06:15:20,232 - cnv_pipe.batch.run_model.cluster1039 - INFO - Child process finished cluster 1039. Wrote cluster_1039_samples.csv and cluster_1039_params.csv
2026-06-03 06:15:20,234 - cnv_pipe.batch.run_model - INFO - Cluster 1039 finished in 178.20 seconds. Status: SUCCESS