mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-usufep7c because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:09:39,897 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:09:40,779 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:09:40,962 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:10:26,218 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:10:26,319 - cnv_pipe.batch.run_model - INFO - Processing cluster 731 with 198 probes
2026-06-03 06:10:26,759 - cnv_pipe.batch.run_model.cluster731 - INFO - Child process started for cluster 731 with 198 probes
2026-06-03 06:15:46,735 - cnv_pipe.batch.run_model.cluster731 - INFO - Child process finished cluster 731. Wrote cluster_731_samples.csv and cluster_731_params.csv
2026-06-03 06:15:46,737 - cnv_pipe.batch.run_model - INFO - Cluster 731 finished in 320.42 seconds. Status: SUCCESS