mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qf9fy9am because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:09:19,768 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:09:20,624 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:09:20,810 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:10:05,567 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:10:05,785 - cnv_pipe.batch.run_model - INFO - Processing cluster 687 with 193 probes
2026-06-03 06:10:06,181 - cnv_pipe.batch.run_model.cluster687 - INFO - Child process started for cluster 687 with 193 probes
2026-06-03 06:15:23,295 - cnv_pipe.batch.run_model.cluster687 - INFO - Child process finished cluster 687. Wrote cluster_687_samples.csv and cluster_687_params.csv
2026-06-03 06:15:23,302 - cnv_pipe.batch.run_model - INFO - Cluster 687 finished in 317.52 seconds. Status: SUCCESS