mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2l1wiiq9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:08:15,997 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:08:16,868 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:08:17,042 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:09:01,786 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:09:02,021 - cnv_pipe.batch.run_model - INFO - Processing cluster 514 with 176 probes
2026-06-03 06:09:02,446 - cnv_pipe.batch.run_model.cluster514 - INFO - Child process started for cluster 514 with 176 probes
2026-06-03 06:13:54,230 - cnv_pipe.batch.run_model.cluster514 - INFO - Child process finished cluster 514. Wrote cluster_514_samples.csv and cluster_514_params.csv
2026-06-03 06:13:54,232 - cnv_pipe.batch.run_model - INFO - Cluster 514 finished in 292.21 seconds. Status: SUCCESS