mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kld8849k because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:08:33,311 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:08:34,240 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:08:34,426 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:09:23,199 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:09:23,442 - cnv_pipe.batch.run_model - INFO - Processing cluster 569 with 160 probes
2026-06-03 06:09:23,855 - cnv_pipe.batch.run_model.cluster569 - INFO - Child process started for cluster 569 with 160 probes
2026-06-03 06:13:46,749 - cnv_pipe.batch.run_model.cluster569 - INFO - Child process finished cluster 569. Wrote cluster_569_samples.csv and cluster_569_params.csv
2026-06-03 06:13:46,751 - cnv_pipe.batch.run_model - INFO - Cluster 569 finished in 263.31 seconds. Status: SUCCESS