mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vqgjcu0a because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:10:13,526 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:10:14,378 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:10:14,555 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:11:04,824 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:11:05,119 - cnv_pipe.batch.run_model - INFO - Processing cluster 840 with 199 probes
2026-06-03 06:11:05,558 - cnv_pipe.batch.run_model.cluster840 - INFO - Child process started for cluster 840 with 199 probes
2026-06-03 06:16:17,623 - cnv_pipe.batch.run_model.cluster840 - INFO - Child process finished cluster 840. Wrote cluster_840_samples.csv and cluster_840_params.csv
2026-06-03 06:16:17,625 - cnv_pipe.batch.run_model - INFO - Cluster 840 finished in 312.51 seconds. Status: SUCCESS