File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/e9c71970949e66b7f84fa19527e099/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6hvs6gck because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:12:23,349 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:12:24,250 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:12:24,430 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:13:11,822 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:13:12,073 - cnv_pipe.batch.run_model - INFO - Processing cluster 1171 with 189 probes
2026-06-03 06:13:12,516 - cnv_pipe.batch.run_model.cluster1171 - INFO - Child process started for cluster 1171 with 189 probes
2026-06-03 06:18:13,148 - cnv_pipe.batch.run_model.cluster1171 - INFO - Child process finished cluster 1171. Wrote cluster_1171_samples.csv and cluster_1171_params.csv
2026-06-03 06:18:13,151 - cnv_pipe.batch.run_model - INFO - Cluster 1171 finished in 301.08 seconds. Status: SUCCESS