mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-e5fszxa0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:09:04,138 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:09:05,078 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:09:05,268 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:09:53,071 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:09:53,276 - cnv_pipe.batch.run_model - INFO - Processing cluster 642 with 79 probes
2026-06-03 06:09:53,714 - cnv_pipe.batch.run_model.cluster642 - INFO - Child process started for cluster 642 with 79 probes
2026-06-03 06:12:22,178 - cnv_pipe.batch.run_model.cluster642 - INFO - Child process finished cluster 642. Wrote cluster_642_samples.csv and cluster_642_params.csv
2026-06-03 06:12:22,180 - cnv_pipe.batch.run_model - INFO - Cluster 642 finished in 148.90 seconds. Status: SUCCESS