File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/73/7561c3891136674b2be1af4949102d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2q2mulz_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:09:01,640 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:09:02,533 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:09:02,739 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:09:47,634 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:09:47,868 - cnv_pipe.batch.run_model - INFO - Processing cluster 637 with 184 probes
2026-06-03 06:09:48,291 - cnv_pipe.batch.run_model.cluster637 - INFO - Child process started for cluster 637 with 184 probes
2026-06-03 06:15:55,532 - cnv_pipe.batch.run_model.cluster637 - INFO - Child process finished cluster 637. Wrote cluster_637_samples.csv and cluster_637_params.csv
2026-06-03 06:15:55,535 - cnv_pipe.batch.run_model - INFO - Cluster 637 finished in 367.67 seconds. Status: SUCCESS