mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ao62_xbi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:09:37,435 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:09:38,389 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:09:38,569 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:10:25,482 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:10:25,739 - cnv_pipe.batch.run_model - INFO - Processing cluster 729 with 175 probes
2026-06-03 06:10:26,150 - cnv_pipe.batch.run_model.cluster729 - INFO - Child process started for cluster 729 with 175 probes
2026-06-03 06:15:05,611 - cnv_pipe.batch.run_model.cluster729 - INFO - Child process finished cluster 729. Wrote cluster_729_samples.csv and cluster_729_params.csv
2026-06-03 06:15:05,613 - cnv_pipe.batch.run_model - INFO - Cluster 729 finished in 279.87 seconds. Status: SUCCESS