mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-uefmnvio because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:08:44,952 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:08:45,863 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:08:46,045 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:09:31,536 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:09:31,631 - cnv_pipe.batch.run_model - INFO - Processing cluster 596 with 180 probes
2026-06-03 06:09:32,015 - cnv_pipe.batch.run_model.cluster596 - INFO - Child process started for cluster 596 with 180 probes
2026-06-03 06:14:17,070 - cnv_pipe.batch.run_model.cluster596 - INFO - Child process finished cluster 596. Wrote cluster_596_samples.csv and cluster_596_params.csv
2026-06-03 06:14:17,073 - cnv_pipe.batch.run_model - INFO - Cluster 596 finished in 285.44 seconds. Status: SUCCESS