File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/4af2a35c72d59804b0e7c8a70dce85/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-74mcwf8m because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:19:14,669 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:19:15,547 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:19:15,718 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:19:59,844 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:19:59,934 - cnv_pipe.batch.run_model - INFO - Processing cluster 779 with 200 probes
2026-06-03 06:20:00,413 - cnv_pipe.batch.run_model.cluster779 - INFO - Child process started for cluster 779 with 200 probes
2026-06-03 06:24:25,018 - cnv_pipe.batch.run_model.cluster779 - INFO - Child process finished cluster 779. Wrote cluster_779_samples.csv and cluster_779_params.csv
2026-06-03 06:24:25,020 - cnv_pipe.batch.run_model - INFO - Cluster 779 finished in 265.09 seconds. Status: SUCCESS