File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/246e47c45373b2350849864bf17146/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0lp_4zmg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:09:59,545 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:10:00,752 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:10:00,998 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:10:57,409 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:10:57,725 - cnv_pipe.batch.run_model - INFO - Processing cluster 801 with 177 probes
2026-06-03 06:10:58,302 - cnv_pipe.batch.run_model.cluster801 - INFO - Child process started for cluster 801 with 177 probes
2026-06-03 06:16:38,649 - cnv_pipe.batch.run_model.cluster801 - INFO - Child process finished cluster 801. Wrote cluster_801_samples.csv and cluster_801_params.csv
2026-06-03 06:16:38,652 - cnv_pipe.batch.run_model - INFO - Cluster 801 finished in 340.93 seconds. Status: SUCCESS