mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nytcx9hb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:08:06,053 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:08:06,897 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:08:07,072 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:08:51,249 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:08:51,369 - cnv_pipe.batch.run_model - INFO - Processing cluster 487 with 183 probes
2026-06-03 06:08:51,795 - cnv_pipe.batch.run_model.cluster487 - INFO - Child process started for cluster 487 with 183 probes
2026-06-03 06:14:00,319 - cnv_pipe.batch.run_model.cluster487 - INFO - Child process finished cluster 487. Wrote cluster_487_samples.csv and cluster_487_params.csv
2026-06-03 06:14:00,321 - cnv_pipe.batch.run_model - INFO - Cluster 487 finished in 308.95 seconds. Status: SUCCESS