mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5pi0hi9x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:05:53,828 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:05:54,667 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:05:54,841 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:06:38,385 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:06:38,628 - cnv_pipe.batch.run_model - INFO - Processing cluster 90 with 181 probes
2026-06-03 06:06:39,055 - cnv_pipe.batch.run_model.cluster90 - INFO - Child process started for cluster 90 with 181 probes
2026-06-03 06:11:27,783 - cnv_pipe.batch.run_model.cluster90 - INFO - Child process finished cluster 90. Wrote cluster_90_samples.csv and cluster_90_params.csv
2026-06-03 06:11:27,786 - cnv_pipe.batch.run_model - INFO - Cluster 90 finished in 289.16 seconds. Status: SUCCESS