File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/6a6c51af043dc4cfb8851c0e9ee094/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s6s49bx8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:08:12,051 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:08:12,959 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:08:13,155 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:08:58,838 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:08:58,936 - cnv_pipe.batch.run_model - INFO - Processing cluster 510 with 193 probes
2026-06-03 06:08:59,500 - cnv_pipe.batch.run_model.cluster510 - INFO - Child process started for cluster 510 with 193 probes
2026-06-03 06:14:30,952 - cnv_pipe.batch.run_model.cluster510 - INFO - Child process finished cluster 510. Wrote cluster_510_samples.csv and cluster_510_params.csv
2026-06-03 06:14:30,955 - cnv_pipe.batch.run_model - INFO - Cluster 510 finished in 332.02 seconds. Status: SUCCESS