File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7f/80a99fe5b14b2314d8fc5c75c760a5/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tm5jbolx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:19:14,405 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:19:15,210 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:19:15,383 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:19:57,573 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:19:57,791 - cnv_pipe.batch.run_model - INFO - Processing cluster 883 with 193 probes
2026-06-03 06:19:58,182 - cnv_pipe.batch.run_model.cluster883 - INFO - Child process started for cluster 883 with 193 probes
2026-06-03 06:24:25,793 - cnv_pipe.batch.run_model.cluster883 - INFO - Child process finished cluster 883. Wrote cluster_883_samples.csv and cluster_883_params.csv
2026-06-03 06:24:25,795 - cnv_pipe.batch.run_model - INFO - Cluster 883 finished in 268.00 seconds. Status: SUCCESS