mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zqi7dew0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:11:28,521 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:11:29,502 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:11:29,684 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:12:17,651 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:12:17,755 - cnv_pipe.batch.run_model - INFO - Processing cluster 1024 with 199 probes
2026-06-03 06:12:18,317 - cnv_pipe.batch.run_model.cluster1024 - INFO - Child process started for cluster 1024 with 199 probes
2026-06-03 06:17:29,171 - cnv_pipe.batch.run_model.cluster1024 - INFO - Child process finished cluster 1024. Wrote cluster_1024_samples.csv and cluster_1024_params.csv
2026-06-03 06:17:29,173 - cnv_pipe.batch.run_model - INFO - Cluster 1024 finished in 311.42 seconds. Status: SUCCESS