File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/8ec87e0757bc54fed9d83776aac3b6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_zdtdrli because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:10:36,604 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:10:37,457 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:10:37,638 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:11:23,769 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:11:24,026 - cnv_pipe.batch.run_model - INFO - Processing cluster 891 with 151 probes
2026-06-03 06:11:24,482 - cnv_pipe.batch.run_model.cluster891 - INFO - Child process started for cluster 891 with 151 probes
2026-06-03 06:15:49,422 - cnv_pipe.batch.run_model.cluster891 - INFO - Child process finished cluster 891. Wrote cluster_891_samples.csv and cluster_891_params.csv
2026-06-03 06:15:49,424 - cnv_pipe.batch.run_model - INFO - Cluster 891 finished in 265.40 seconds. Status: SUCCESS