File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/11ca135b9c6b1f8f3f06d77b541d3e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4jqllfwi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:19:14,951 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:19:15,841 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:19:16,008 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:20:01,582 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:20:01,807 - cnv_pipe.batch.run_model - INFO - Processing cluster 909 with 166 probes
2026-06-03 06:20:02,193 - cnv_pipe.batch.run_model.cluster909 - INFO - Child process started for cluster 909 with 166 probes
2026-06-03 06:23:58,565 - cnv_pipe.batch.run_model.cluster909 - INFO - Child process finished cluster 909. Wrote cluster_909_samples.csv and cluster_909_params.csv
2026-06-03 06:23:58,567 - cnv_pipe.batch.run_model - INFO - Cluster 909 finished in 236.76 seconds. Status: SUCCESS