mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4lxnb924 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:11:18,933 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:11:19,796 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:11:19,971 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:12:04,694 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:12:04,947 - cnv_pipe.batch.run_model - INFO - Processing cluster 1000 with 101 probes
2026-06-03 06:12:05,359 - cnv_pipe.batch.run_model.cluster1000 - INFO - Child process started for cluster 1000 with 101 probes
2026-06-03 06:15:05,507 - cnv_pipe.batch.run_model.cluster1000 - INFO - Child process finished cluster 1000. Wrote cluster_1000_samples.csv and cluster_1000_params.csv
2026-06-03 06:15:05,509 - cnv_pipe.batch.run_model - INFO - Cluster 1000 finished in 180.56 seconds. Status: SUCCESS