mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-j16raa3y because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:05:53,736 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:05:54,890 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:05:55,123 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:06:44,052 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:06:44,146 - cnv_pipe.batch.run_model - INFO - Processing cluster 83 with 161 probes
2026-06-03 06:06:44,648 - cnv_pipe.batch.run_model.cluster83 - INFO - Child process started for cluster 83 with 161 probes
2026-06-03 06:11:21,579 - cnv_pipe.batch.run_model.cluster83 - INFO - Child process finished cluster 83. Wrote cluster_83_samples.csv and cluster_83_params.csv
2026-06-03 06:11:21,580 - cnv_pipe.batch.run_model - INFO - Cluster 83 finished in 277.43 seconds. Status: SUCCESS