mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r4inl3p8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:08:15,798 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:08:16,741 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:08:16,923 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:09:03,123 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:09:03,218 - cnv_pipe.batch.run_model - INFO - Processing cluster 519 with 196 probes
2026-06-03 06:09:03,787 - cnv_pipe.batch.run_model.cluster519 - INFO - Child process started for cluster 519 with 196 probes
2026-06-03 06:14:17,606 - cnv_pipe.batch.run_model.cluster519 - INFO - Child process finished cluster 519. Wrote cluster_519_samples.csv and cluster_519_params.csv
2026-06-03 06:14:17,609 - cnv_pipe.batch.run_model - INFO - Cluster 519 finished in 314.39 seconds. Status: SUCCESS