mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jrj1nxu0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:08:10,742 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:08:11,674 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:08:11,855 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:08:59,762 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:08:59,860 - cnv_pipe.batch.run_model - INFO - Processing cluster 504 with 101 probes
2026-06-03 06:09:00,286 - cnv_pipe.batch.run_model.cluster504 - INFO - Child process started for cluster 504 with 101 probes
2026-06-03 06:12:05,993 - cnv_pipe.batch.run_model.cluster504 - INFO - Child process finished cluster 504. Wrote cluster_504_samples.csv and cluster_504_params.csv
2026-06-03 06:12:05,994 - cnv_pipe.batch.run_model - INFO - Cluster 504 finished in 186.13 seconds. Status: SUCCESS