File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/0569c440f757e36fe39a686c6b1eea/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2dy_ujln because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:10:03,844 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:10:04,718 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:10:04,901 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:10:51,275 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:10:51,515 - cnv_pipe.batch.run_model - INFO - Processing cluster 825 with 164 probes
2026-06-03 06:10:51,950 - cnv_pipe.batch.run_model.cluster825 - INFO - Child process started for cluster 825 with 164 probes
2026-06-03 06:15:32,933 - cnv_pipe.batch.run_model.cluster825 - INFO - Child process finished cluster 825. Wrote cluster_825_samples.csv and cluster_825_params.csv
2026-06-03 06:15:32,935 - cnv_pipe.batch.run_model - INFO - Cluster 825 finished in 281.42 seconds. Status: SUCCESS