File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/e29db8009d2b7aeb04cbd3e52093be/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-x2ml6vrs because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:12:08,903 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:12:09,748 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:12:09,925 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:12:55,294 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:12:55,557 - cnv_pipe.batch.run_model - INFO - Processing cluster 1097 with 191 probes
2026-06-03 06:12:55,989 - cnv_pipe.batch.run_model.cluster1097 - INFO - Child process started for cluster 1097 with 191 probes
2026-06-03 06:18:03,412 - cnv_pipe.batch.run_model.cluster1097 - INFO - Child process finished cluster 1097. Wrote cluster_1097_samples.csv and cluster_1097_params.csv
2026-06-03 06:18:03,415 - cnv_pipe.batch.run_model - INFO - Cluster 1097 finished in 307.86 seconds. Status: SUCCESS