File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/c557666b99227b9c702ba195ffd115/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fuxk7t68 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:10:19,837 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:10:20,730 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:10:20,910 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:11:06,786 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:11:07,020 - cnv_pipe.batch.run_model - INFO - Processing cluster 852 with 189 probes
2026-06-03 06:11:07,470 - cnv_pipe.batch.run_model.cluster852 - INFO - Child process started for cluster 852 with 189 probes
2026-06-03 06:16:21,379 - cnv_pipe.batch.run_model.cluster852 - INFO - Child process finished cluster 852. Wrote cluster_852_samples.csv and cluster_852_params.csv
2026-06-03 06:16:21,381 - cnv_pipe.batch.run_model - INFO - Cluster 852 finished in 314.36 seconds. Status: SUCCESS