mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5a9wvmc4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:10:34,540 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:10:35,462 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:10:35,656 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:11:20,817 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:11:21,043 - cnv_pipe.batch.run_model - INFO - Processing cluster 886 with 190 probes
2026-06-03 06:11:21,473 - cnv_pipe.batch.run_model.cluster886 - INFO - Child process started for cluster 886 with 190 probes
2026-06-03 06:16:24,231 - cnv_pipe.batch.run_model.cluster886 - INFO - Child process finished cluster 886. Wrote cluster_886_samples.csv and cluster_886_params.csv
2026-06-03 06:16:24,234 - cnv_pipe.batch.run_model - INFO - Cluster 886 finished in 303.19 seconds. Status: SUCCESS