mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-stduap_h because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:10:07,431 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:10:08,372 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:10:08,561 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:10:56,518 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:10:56,792 - cnv_pipe.batch.run_model - INFO - Processing cluster 833 with 183 probes
2026-06-03 06:10:57,237 - cnv_pipe.batch.run_model.cluster833 - INFO - Child process started for cluster 833 with 183 probes
2026-06-03 06:15:54,733 - cnv_pipe.batch.run_model.cluster833 - INFO - Child process finished cluster 833. Wrote cluster_833_samples.csv and cluster_833_params.csv
2026-06-03 06:15:54,736 - cnv_pipe.batch.run_model - INFO - Cluster 833 finished in 297.94 seconds. Status: SUCCESS